Analysis Results: https://github.com/kojix2/unclone

2026-10-04 18:47

Lines of Code by Language

Code, Comments, and Blank Lines Ratio

GitDiagram DeepWiki
Language ↕ Files ↕ Code ↕ Comments ↕ Blanks ↕ Total ↕
▶ C Header
1 83 0 12 95
File ↕ Code ↕ Comments ↕ Blanks ↕ Total ↕
./rust-kernel/include/pcv_kernel.h 83 0 12 95
▶ Crystal
31 3832 61 524 4417
File ↕ Code ↕ Comments ↕ Blanks ↕ Total ↕
./src/unclone/sanitize.cr 28 1 3 32
./src/unclone/phyclone_kernel.cr 124 2 4 130
./src/unclone/output.cr 42 0 3 45
./src/unclone/ffi.cr 98 2 9 109
./src/unclone/phyclone.cr 1300 30 155 1485
./src/unclone/result.cr 46 0 6 52
./src/unclone/kernel.cr 19 0 2 21
./src/unclone/vi_kernel.cr 107 0 17 124
./src/unclone/config.cr 166 0 25 191
./src/unclone/run.cr 75 0 16 91
./src/unclone/errors.cr 6 0 1 7
./src/unclone/kernel_result.cr 70 0 15 85
./src/unclone/cli.cr 301 1 49 351
./src/unclone/indexing.cr 74 0 11 85
./src/unclone/input.cr 126 0 13 139
./src/unclone.cr 49 0 3 52
./src/main.cr 2 0 1 3
./spec/vi_missing_observation_spec.cr 74 0 10 84
./spec/config_spec.cr 21 0 1 22
./spec/sanitize_spec.cr 52 0 7 59
./spec/input_spec.cr 80 0 10 90
./spec/phyclone_compat_spec.cr 38 0 5 43
./spec/ffi_header_spec.cr 40 1 5 46
./spec/golden_spec.cr 76 0 12 88
./spec/phyclone_legacy_spec.cr 6 0 1 7
./spec/indexing_spec.cr 58 2 12 72
./spec/unclone_spec.cr 115 0 25 140
./spec/spec_helper.cr 2 0 0 2
./spec/kernel_spec.cr 27 0 2 29
./spec/output_spec.cr 69 0 5 74
./spec/phyclone_spec.cr 541 22 96 659
▶ JSON
8 3798 0 0 3798
File ↕ Code ↕ Comments ↕ Blanks ↕ Total ↕
./rust-kernel/src/phyclone/compat/testdata/phyclone_oracle_fixed_tree_scores.json 1369 0 0 1369
./rust-kernel/src/phyclone/compat/testdata/phyclone_oracle_fixture.json 396 0 0 396
./rust-kernel/src/phyclone/compat/testdata/phyclone_oracle_fixture_binomial.json 396 0 0 396
./rust-kernel/src/phyclone/compat/testdata/phyclone_oracle_fixture_cellular_prevalence.json 395 0 0 395
./rust-kernel/src/phyclone/compat/testdata/phyclone_oracle_fixture_outlier_split.json 612 0 0 612
./rust-kernel/src/phyclone/compat/testdata/phyclone_oracle_fixture_cn_purity.json 359 0 0 359
./rust-kernel/src/phyclone/compat/testdata/phyclone_oracle_fixture_precision50.json 243 0 0 243
./paper/data/environment.json 28 0 0 28
▶ Makefile
2 87 0 20 107
File ↕ Code ↕ Comments ↕ Blanks ↕ Total ↕
./Makefile 61 0 14 75
./paper/Makefile 26 0 6 32
▶ Markdown
5 0 385 169 554
File ↕ Code ↕ Comments ↕ Blanks ↕ Total ↕
./rust-kernel/src/phyclone/compat/testdata/README.md 0 16 5 21
./paper/paper.md 0 80 37 117
./paper/paper-ja.md 0 83 37 120
./paper/README.md 0 36 14 50
./README.md 0 170 76 246
▶ Python
4 399 13 86 498
File ↕ Code ↕ Comments ↕ Blanks ↕ Total ↕
./src/unclone/python_init_vi.py 13 8 2 23
./scripts/export_phyclone_oracle_fixture.py 220 1 46 267
./paper/scripts/benchmark.py 129 1 27 157
./paper/scripts/plot_figures.py 37 3 11 51
▶ Rust
29 11951 388 1702 14041
File ↕ Code ↕ Comments ↕ Blanks ↕ Total ↕
./rust-kernel/src/c_api/entrypoints.rs 621 0 76 697
./rust-kernel/src/c_api/mod.rs 3 0 0 3
./rust-kernel/src/c_api/abi.rs 48 0 5 53
./rust-kernel/src/c_api/ffi.rs 940 11 86 1037
./rust-kernel/src/core/preprocess.rs 387 0 47 434
./rust-kernel/src/core/inference.rs 895 0 114 1009
./rust-kernel/src/core/likelihood.rs 135 0 17 152
./rust-kernel/src/core/math.rs 19 0 4 23
./rust-kernel/src/core/mod.rs 5 0 0 5
./rust-kernel/src/core/types.rs 61 0 8 69
./rust-kernel/src/lib.rs 6 0 1 7
./rust-kernel/src/phyclone/compat/proposal.rs 854 72 155 1081
./rust-kernel/src/phyclone/compat/smc.rs 1819 90 270 2179
./rust-kernel/src/phyclone/compat/tree.rs 526 0 88 614
./rust-kernel/src/phyclone/compat/root_permutation.rs 229 15 50 294
./rust-kernel/src/phyclone/compat/tree_ids.rs 2 0 0 2
./rust-kernel/src/phyclone/compat/likelihood_grid.rs 24 0 6 30
./rust-kernel/src/phyclone/compat/mod.rs 15 0 0 15
./rust-kernel/src/phyclone/compat/distributions.rs 845 34 123 1002
./rust-kernel/src/phyclone/compat/convolution.rs 337 0 71 408
./rust-kernel/src/phyclone/compat/tree_model.rs 1022 44 190 1256
./rust-kernel/src/phyclone/compat/tree_node.rs 192 2 29 223
./rust-kernel/src/phyclone/compat/data.rs 36 0 4 40
./rust-kernel/src/phyclone/compat/tree_stats.rs 25 0 5 30
./rust-kernel/src/phyclone/compat/trace.rs 908 24 77 1009
./rust-kernel/src/phyclone/compat/samplers.rs 350 39 70 459
./rust-kernel/src/phyclone/compat/loader.rs 1458 53 187 1698
./rust-kernel/src/phyclone/mod.rs 5 0 1 6
./rust-kernel/examples/gemm_bench.rs 184 4 18 206
▶ Plain Text
2 0 9 0 9
File ↕ Code ↕ Comments ↕ Blanks ↕ Total ↕
./paper/benchmark-requirements.txt 0 8 0 8
./paper/requirements.txt 0 1 0 1
▶ TOML
1 14 0 2 16
File ↕ Code ↕ Comments ↕ Blanks ↕ Total ↕
./rust-kernel/Cargo.toml 14 0 2 16
▶ YAML
1 11 0 4 15
File ↕ Code ↕ Comments ↕ Blanks ↕ Total ↕
./shard.yml 11 0 4 15
Total 84 20175 856 2519 23550

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